Index

Core packages

dbProject

Project directories, connection lifecycle, pinned resources, and database-backed data objects.

dbMatrix

Sparse and dense matrix operations that keep large arrays in an analytical database.

dbSpatial

Spatial geometry data loading, geometry operations, measurements, and joins.

dbSequence

Genomic data ingestion, lazy intervals, overlap filtering, and coverage over database-backed data.

dbVisuals (incubating)

Visualization workspace for database-backed data.

Built with dbverse

These packages and projects use the same database-backed analysis model.

• GiottoDB supports database-backed spatial omics analysis in the Giotto ecosystem.
• Giotto is a spatial multi-omics analysis toolbox.
• GiottoSeq supports genomic data analysis in the Giotto framework.